rs30336268 SNP Detail

Summary

• ID
  rs30336268
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67741391 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGC ACCCAGAGGC CAGAAGAGGG
  Y
  GACGAATTCC CAGGAGCTGA AGTCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46398042	mCV23551801	ABI	CRAMUS_MOUSE	f	SNP	T		C
ss136586211	ENSMUSSNP3481778	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
ss322992782	CHEV_9_67681916	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30336268					SNP	T	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67741391 () rs orientation: forward

Symbol	Name	Function Class
C2cd4a	C2 calcium-dependent domain containing 4A	1779 bp upstream
Rr681991	regulatory region 681991	1425 bp distal
Rr681992	regulatory region 681992	within coordinates
Tssr90357	transcription start site region 90357	1778 bp upstream