rs30340305 SNP Detail

Summary

• ID
  rs30340305
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:121426310 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGT CCGTTGAGTC CTGTTTATAC
  K
  CCCTCCAAAC ATCACGTGAC CTCCA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46398729	mCV23081266	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T	T
ss137068130	ENSMUSSNP7083224	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30340305					SNP	T	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:121426310 () rs orientation: forward

Symbol	Name	Function Class
Gm57058	predicted gene, 57058	within coordinates
Lyzl4	lysozyme-like 4	within coordinates
Lyzl4os	lysozyme-like 4, opposite strand	within coordinates
Rr199244	regulatory region 199244	1910 bp distal
Tssr92055	transcription start site region 92055	29 bp upstream