rs30340865 SNP Detail

Summary

• ID
  rs30340865
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:52582688 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAAATCTC TTAGTCTGTA
  AGGCTTGAGA AAGTAAGCCA TTGTTTTTAG AGACAGAAAC ATAGCATTAT CTGCATCAAT
  TCCAATCTGG GACACAGAAA TGGTAATTTG GAAAAGAGAT TAGGCTTCAA TATTCAGCCC
  CAAAGGAACA TGTATATATG TATATGTGCT TGTATATATG TATATGTGTA TCTAGTGTTT
  K
  GTAAATTAAT CCCTGTTTGG GAAATTCAAA TAACAAGAAA ATGGATCCAC GCCAGCCCAG
  TGAAAGCAAG CTATGTTAAT ATCCATCCTT CTATCACATC AAACAGATGA GGTTAAAATG
  TCTTCCTCCT GGGGCTGGAG ATGTGAGATT GAGTGTTTGG TTTTGAGTTT TTTTTTTAAA
  TCACTAATTT ATATTTGCTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46398930	mCV25222805	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss136500072	ENSMUSSNP5200289	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30340865					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:52582688 () rs orientation: forward

Symbol	Name	Function Class
AI593442	expressed sequence AI593442	1654 bp downstream