rs30350173 SNP Detail

Summary

• ID
  rs30350173
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:10613037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGTCTTCAC TGGTTTTGAC TTCTGAGAGG AAAAAAGGAC
  TTGGCCCTAG GGAAAATCCC CAGCAAACTT TCCTGTACTG CTATGGTTCC CCCTAGGTTT
  Y
  CACATTTGAC CCAGATTATT AACCCTAAGA GCCAGGCAAG TTCGTCTTAT CCTGTATCAT
  TTCTGTCTGA TACATGGACA GGCATAGAGG GTGCTCTGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39671770	mCV23007576	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss146043958	ENSMUSSNP6274534	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
ss325720715	CHEV_19_10710163	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs30350173					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:10613037 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10616	CpG island 10616	980 bp distal
Cpgi10617	CpG island 10617	314 bp distal
Rr362969	regulatory region 362969	within coordinates
Tssr155079	transcription start site region 155079	1428 bp downstream
Tssr155080	transcription start site region 155080	1361 bp downstream
Tssr155081	transcription start site region 155081	1349 bp downstream
Vwce	von Willebrand factor C and EGF domains	within coordinates