rs30350847 SNP Detail

Summary

• ID
  rs30350847
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:4920146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGTAACATC TTGGGGTAGC TAGAACTGGC AGCCTCCGCC
  ACTAGTGGAT GGCTGATATT GGCTAGCTGA TAAGGTTAGG GCAGGAGATT CTGTGCCCAG
  Y
  AGTTGTGTTA TCTGTCAAGT TCAAGGATAA TAAAGCTGTC TGAGTGTTTT TCATTCTGCA
  AAGCAAAGAC AGGTAGAAAC AGTAGCCGGG CCACAGATG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39671953	mCV23230656	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
ss146008672	ENSMUSSNP2532112	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30350847					SNP	C	C	T	C	?

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:4920146 () rs orientation: forward

Symbol	Name	Function Class
Actn3	actinin alpha 3	within coordinates
Tssr154367	transcription start site region 154367	722 bp downstream
Tssr154368	transcription start site region 154368	704 bp downstream
Tssr154369	transcription start site region 154369	958 bp upstream
Tssr157522	transcription start site region 157522	669 bp upstream