rs30351914 SNP Detail

Summary

• ID
  rs30351914
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr19:23123259 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACGGTGTTAA TGGGGTAGAT TTCATAAACT GCTTCCTTCC
  TCCCAGATGC GTTTCCAGCT AAACCCGACT GAGTCGGGAG GGGTTGACTT GCCAATGGAG
  S
  TATGTCTCCA CTGTTTTCCC ATTATAGGTC CCCTAAGGAG ACTTGAGATT TGTTTTTCTA
  ACAAATGCCC ACCCTATACC TACCCTATGG TGTCTTAAC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39672720	mCV24752524	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	C
ss146216217	ENSMUSSNP382714	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		C
ss325768049	CHEV_19_23220385	CHEVERUD	SCREENING_POP	f	SNP						C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30351914					SNP	G	G	G	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:23123259 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Klf9	Kruppel-like transcription factor 9			Intron
				Noncoding-Transcript-Variant
Rr545293	regulatory region 545293			146 bp proximal