rs30352139 SNP Detail

Summary

• ID
  rs30352139
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50670957 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCATGGAGGG TTTCTCACTG TATATAGCCT TGGCTGCCTT
  GGAAGTTACT CTGTAGTCCA GGCTGGCTTT AAACTCTGAG ATAACCTGCC TGTGCTTCTG
  Y
  CTCCGGAAAG CTGGGATTAA AGGCGTGCAC TAGCACACAC AGCTGAGATT TTAAATATAT
  TTTTATATTT TGTGTATGAG TGTTTACCTG AATATAAGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46399122	mCV25205674	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss136480996	ENSMUSSNP5676803	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss322959941	CHEV_9_50567762	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30352139					SNP	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50670957 () rs orientation: forward

Symbol	Name	Function Class
Cfap68	cilia and flagella associated protein 68	1717 bp downstream
Gm67659	predicted gene, 67659	within coordinates