rs30352314 SNP Detail

Summary

• ID
  rs30352314
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117768656 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCACT TAATGAATAA TAAAAAAACC
  W
  CTTGTGCTGG GTCTTTAAAA CAATC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45419706	mCV23489838	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T	T
ss135695318	ENSMUSSNP422162	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		T		A
ss320900746	CHEV_3_117677925	CHEVERUD	SCREENING_POP	f	SNP						A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs30352314					SNP	A	A	A	T	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117768656 () rs orientation: forward

Symbol	Name	Function Class
4921521D15Rik	RIKEN cDNA 4921521D15 gene	1470 bp downstream
Gm32344	predicted gene, 32344	within coordinates
Rr583879	regulatory region 583879	720 bp proximal
Rr583880	regulatory region 583880	800 bp proximal