rs30356590 SNP Detail

Summary

• ID
  rs30356590
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:10185696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATGT ATATTTACTT CAGAAGAAAA
  R
  GACTGTCTTG GGGACAGGAA GCAAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss39673079	mCV23259301	ABI	CRAMUS_MOUSE	f	SNP	G	G	A			G		A
ss50603722	NES13643223	PERLEGEN	MM_PANEL2	f	SNP	G			G	G		G		A	A		G	G	G	G
ss146041433	ENSMUSSNP3748808	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A					A
ss325720155	CHEV_19_10282822	CHEVERUD	SCREENING_POP	f	SNP											A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs30356590					SNP	G	G	A	G	G	G	G	A	A	A	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50603722	NES13643223	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:10185696 () rs orientation: forward

Symbol	Name	Function Class
Myrf	myelin regulatory factor	within coordinates
Rr356596	regulatory region 356596	1696 bp distal
Rr361277	regulatory region 361277	232 bp distal
Rr363809	regulatory region 363809	505 bp proximal
Tmem258	transmembrane protein 258	508 bp downstream
Tssr155040	transcription start site region 155040	1853 bp downstream