rs30356606 SNP Detail

Summary

• ID
  rs30356606
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:158264856 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGGAAGTA AGAGATTCCC
  AAGTTAGGTA ACTGCCCTTA ATGATTGGGT AGGAAATCAG CTCCACTTAC ACTAAATTAA
  TAGATTATCA ACATTCAGGA CATTTTTTAA ACCTGAGGAA TTCAAATACA GATATTGCTA
  AGTACACCTC TAAATAACTT TAGTCTCAGA TAGTTAAGGA GAAATAAAAT CACCCCTGAA
  S
  CCTGCTTTCT CTCCCTTCCC TGTTGTGATG AGTATTTTCA AGGAAGCCAG GCAGACTGCT
  CTATTCATTC CCAGCAAGAC CTCCAGGTGG TTCTCTAGAA CCTAGCAACT GGGAGTGCTT
  CAACCAGAGA CAGAAGCACG CGTTTCAGAA AGGCAGCAGC TTTTGGTGTT CTAGAGCACC
  CATGTGCACG TGCTTGTGCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45419754	mCV25102044	ABI	CRAMUS_MOUSE	f	SNP	C	G	G	G
ss136136842	ENSMUSSNP4050713	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs30356606					SNP	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:158264856 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13981	CpG island 13981	1747 bp proximal
Lrrc7	leucine rich repeat containing 7	within coordinates