rs30357705 SNP Detail

Summary

• ID
  rs30357705
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153514061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCTC ATCTAACCAC AGCAGTGCAC
  R
  CTCTCCGTAC TGCAGCACGC CAGCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45421054	mCV24023684	ABI	CRAMUS_MOUSE	f	SNP		G	A					A
ss47466259	NES10336196	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	A	G	A		A	G		A	A	A	G		G
ss136113483	ENSMUSSNP4185146	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
ss321031416	CHEV_3_153471388	CHEVERUD	SCREENING_POP	f	SNP											G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30357705					SNP	G	G	A	G	A	G	A	A	A	G	G	A	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47466259	NES10336196	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153514061 () rs orientation: forward

Symbol	Name	Function Class
Rr587763	regulatory region 587763	1097 bp distal
Rr587764	regulatory region 587764	1855 bp distal
Rr587765	regulatory region 587765	within coordinates