rs30359330 SNP Detail

Summary

• ID
  rs30359330
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:119231948 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATAG AGCGGGGAAA ACCTAAGCGT
  R
  GGGAAGGCGG CCAAGCGGGG TGGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss46399202	mCV24176367	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs30359330					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119231948 () rs orientation: forward

Symbol	Name	Function Class
Acvr2b	activin receptor IIB	Intron
Cpgi22474	CpG island 22474	within coordinates
Gm53515	predicted gene, 53515	984 bp upstream
Gm69683	predicted gene, 69683	1414 bp upstream
Rr688480	regulatory region 688480	1425 bp distal
Rr688481	regulatory region 688481	428 bp distal
Rr688482	regulatory region 688482	898 bp distal
Rr688483	regulatory region 688483	within coordinates
Rr688484	regulatory region 688484	341 bp distal
Rr688485	regulatory region 688485	181 bp distal
Tssr87682	transcription start site region 87682	729 bp downstream
Tssr87683	transcription start site region 87683	657 bp downstream
Tssr87684	transcription start site region 87684	613 bp downstream
Tssr91983	transcription start site region 91983	593 bp downstream