rs30361040 SNP Detail

Summary

• ID
  rs30361040
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:30172048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGCT CCCTAGAGGT GAGTGGTTCG
  R
  GTGGAGTCTT TAGGGATCTT TTGCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45921292	mCV24692152	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	A
ss133095150	ENSMUSSNP4237863	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss321776213	CHEV_6_30122049	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30361040					SNP	A	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:30172048 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17248	CpG island 17248	867 bp proximal
Mirc35hg	microRNA cluster 35, host gene	within coordinates
Rncr4	retina expressed non-coding RNA 4	844 bp upstream
Rr146072	regulatory region 146072	1647 bp distal
Rr146073	regulatory region 146073	47 bp distal
Rr146074	regulatory region 146074	152 bp proximal
Tssr55327	transcription start site region 55327	811 bp upstream