rs30362593 SNP Detail

Summary

• ID
  rs30362593
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138344228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGT AATTCCAATG TTCATCAGAA
  R
  AATATACTGA ATAGCTAGAA GACGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	SM/J
ss45422251	mCV23933615	ABI	CRAMUS_MOUSE	f	SNP		A	G		G		A
ss46998808	NES10883103	PERLEGEN	MM_PANEL2	f	SNP	A		G	G		G	A
ss135955704	ENSMUSSNP3974448	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G				A
ss320980813	CHEV_3_138301431	CHEVERUD	SCREENING_POP	f	SNP								G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	SM/J
rs30362593					SNP	A	A	G	G	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46998808	NES10883103	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138344228 () rs orientation: forward

Symbol	Name	Function Class
Gm65687	predicted gene, 65687	within coordinates
Rr586170	regulatory region 586170	955 bp proximal