rs30362638 SNP Detail

Summary

• ID
  rs30362638
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:134095429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCT CAGAGACTGT AATCAATACA
  R
  CCTTGCTCAG TGCCTCCACA TTGTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45921210	mCV24006912	ABI	CRAMUS_MOUSE	f	SNP		G	A						A
ss48101341	NES11850583	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A	G	A	G	A	A	G		G	A	G	G		G
ss133771315	ENSMUSSNP1706237	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						A
ss321976668	CHEV_6_134068484	CHEVERUD	SCREENING_POP	f	SNP												A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30362638					SNP	G	G	A	A	A	G	A	G	A	A	G	A	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48101341	NES11850583	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:134095429 () rs orientation: forward

Symbol	Name	Function Class
D6Mit374a	DNA segment, Chr 6, Massachusetts Institute of Technology 374a	984 bp proximal
D6Mit374b	DNA segment, Chr 6, Massachusetts Institute of Technology 374b	1018 bp proximal
Etv6	ets variant 6	within coordinates
Rr639573	regulatory region 639573	714 bp proximal