rs30363221 SNP Detail

Summary

• ID
  rs30363221
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32667484 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCCACTGTA TAGCTGCCTA GTTAAGACAG TGACAGTGAC
  ATCCCTGAGA GAAGAGAGGC AATTGGCTGA GGTGGGCCTC TCCAGGCTCA CCCTTCGGGG
  W
  TTGTAGCTCC CTGGTATCAT CTTCCAGGAG AGTTGATGGC TGACTCCCAC ATTCCCTTGA
  AGACTCTGAA TTACTAAGAC TATAACTCTT GTCCGTGGG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46399343	mCV23151934	ABI	CRAMUS_MOUSE	f	SNP		T						T		A
ss50669007	NES14018900	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	A	T		A	A	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30363221					SNP	T	T	T	T	T	A	T	T	A	A	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50669007	NES14018900	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32667484 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr676252	regulatory region 676252	within coordinates
Tssr84301	transcription start site region 84301	1727 bp downstream
Tssr84302	transcription start site region 84302	1538 bp downstream
Tssr84303	transcription start site region 84303	1422 bp downstream