About   Help   FAQ
rs30364065 SNP Detail
Summary
  • ID
    rs30364065
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr3:127796531 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CGTTTGTTTG TGTGCATTTG
    GACAATGCCT GGCTATGAAG ACTCTTACAC TGGAGAGAGT CTCAGCACAT CATTGTAACA
    TAACTGTGTG GAAAGGATAA ATAAAAGAGG GAGCTGGCTG TGTGGTGACT CCTGAGGGAA
    AGCCAGGATG AGAGCAAGGG GAGAGCCCTC GCCCATCTTG AGTGTAGTTC CGTGGCTTCC
    K
    GGGGATTGGT GAGGGTGCTC TTGCCCTGCT TACGACGGCT TTCAGAAGTT TTCTGTAAAA
    TTTGAACAAA AAGACTGAAG ATGAGACACA CAAAAAAGGG AAAGTCTAGT GAGTAAAAGG
    ATTTACTTCA ATAACTCCCC AAATCCTACC CCCAAGTGCG AGGATCATCT CAGTGCTGCA
    CAGCCGCGAG CGAGCAAGCG                                            
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss45422064 mCV25235056 ABI CRAMUS_MOUSE f SNP T T G G
ss135877556 ENSMUSSNP4704977 ENSEMBL ENSEMBL_Sanger f SNP T T G
ss320959102 CHEV_3_127705800 CHEVERUD SCREENING_POP f SNP G T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs30364065 SNP T T G G G T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:127796531 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr52 regulatory region 52 within coordinates
Rr584916 regulatory region 584916 513 bp distal
Rr584917 regulatory region 584917 800 bp distal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory