rs30364470 SNP Detail

Summary

• ID
  rs30364470
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4749299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGCCC CCAAGGCCCC GCCTCTCTTA
  Y
  TGTTCAGCTC CTCCCAGAGC TCCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45922624	mCV24014498	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss321727775	CHEV_6_4699299	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30364470					SNP	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4749299 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17126	CpG island 17126	508 bp distal
Peg10	paternally expressed 10	within coordinates
Rr146220	regulatory region 146220	within coordinates
Tssr1771	transcription start site region 1771	1945 bp downstream
Tssr1772	transcription start site region 1772	1858 bp downstream
Tssr1773	transcription start site region 1773	1847 bp downstream
Tssr54763	transcription start site region 54763	1927 bp downstream
Tssr54764	transcription start site region 54764	1686 bp downstream