rs30365812 SNP Detail

Summary

• ID
  rs30365812
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:35948185 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAACCCGA GGTAAAAGGA
  GGCTAGATTA ATACACGAAA TACATTTTTT TGTTGTTAAT TTAAAGTTAA ATCAGAAGTC
  ATGGCAAAAT TTTGAAGGGG TTCTTTGGGC CACTGTGCTG AAGCTGGCTG GTATCAAGGA
  TAGAAAAACA GAATAACTAG ATAAAGAATT ACACAGAACC TTACAGCCTA CCTAGGCTCG
  R
  ATAGGCAGGC AACAGTAACA ATGGGCGATC CTACCTCAAT GAAGTAGGAG AAAACCAACT
  CACCAAAGCT GTCCTCTGAC CTTCACACAA GGGAGCATGT GAGTGCACGC ACACACACAC
  ACACGCACGC ACACACCACT TTATAAACTT TAAAAAAGAG AGCAGAGCTT AAACTTAATT
  GAAATAAGTA TAAGAGAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47440432	NES11516681	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30365812					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47440432	NES11516681	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:35948185 () rs orientation: forward

Symbol	Name	Function Class
Eri1	exoribonuclease 1	within coordinates
Rr662194	regulatory region 662194	1495 bp distal
Rr662195	regulatory region 662195	1592 bp distal
Rr662196	regulatory region 662196	1497 bp distal
Rr662197	regulatory region 662197	1336 bp distal
Tssr80937	transcription start site region 80937	467 bp upstream