rs30366104 SNP Detail

Summary

• ID
  rs30366104
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:9046287 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTAATGAT TGATGTGGGT
  CACCCACTGT GTATGGTACC ACCCCTGGGC TGGCAGACCT AAATTCTCTA AGAAAGCAGG
  CTGAGCAAGT CAGGAGGAAC AGGCCAGTAA GCAGCCCTGG CCCGGCCTCT GCTGTAGCTC
  CTGCCCTGAT TTACCTCAGT GATGGAGCGT GTGACCTGAG ACCTGTAAGC TGAAACAAAC
  Y
  CTTTCCTCCC CAAGCTGCTT TCGTTAGTGT GAAATCAGAG CAACACACAC AACTAAGACA
  GACGGCTAGA GCCCAGAAGT TTGTCATAAG TCTGGACAAC ACAGCAAGGC CCTTTCTCCA
  GGATTTTAAT TTAAAAACTC ACTTACGGTA CATCCTTATA ATATTCATAA AATATAGAGG
  TTTTATATCA TCATGAAAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45422779	mCV23610486	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30366104					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9046287 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr573358	regulatory region 573358			453 bp proximal
Tpd52	tumor protein D52			Intron
				Noncoding-Transcript-Variant