rs30366288 SNP Detail

Summary

• ID
  rs30366288
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18792781 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTAGGAAA AGAAGAGAGA
  GGAAACATAT TTCAAGACAC TGGCATAAGC AATGACTTTC TATATAGCTT ATGAAGAATA
  ACAATGGCAA GTAAAAGTTT TTGAAATTAA AGAGATTCTA CACAACAAAG GAAACATAGA
  CAGTAAAGAA ACAACCTGAA ATCGTGGGGA AAATTTATTC CAGTTATTCA TCTGTCAGTC
  R
  ATTAATACAG AATATACAAA ATACTCAAAC TCTCTAAATT TCTTTGGCCT TCATGGCAGA
  AGCAATATGA GGAAAGGAAT GTTATTACTT TGGAAATTGT CGCAATAAGA CACATGTGTT
  GTACTGCAGC TGTGAATCTA AGGCCTACCA ACTTTAGAAG TTGATCTGTG GAAAATATGG
  CTATCTTGCC AAGTGCAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45922847	mCV23957280	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss133041126	ENSMUSSNP145716	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs30366288					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18792781 () rs orientation: forward

Symbol	Name	Function Class
Gm43228	predicted gene 43228	69 bp upstream