rs30366459 SNP Detail

Summary

• ID
  rs30366459
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:94092418 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATATACACG TTCTAATGTG
  ACCATTTAAA TGTTTGTTAT TCCTGGACGT GGGAAGTATC CCTGTAATCC CTACACTCAA
  GAGGCTGAAG CAAGAGGATC ATGAGCTCAA AGCCAGCATA AACTACATCG TGAAATCATG
  CCTCAGAAAG AAATAGAAGG AGGCTTATCA TTTTATGGCC ATAACCTAGA CAGACTTTCA
  Y
  GAGGGGCTTT GTAAGAAACA AAGCATTTAT AGTTGAGATG ATCAAATACA CCCATTCTGA
  ACAGAGGTCT TTGTGCTCAG CATCTTTAGA CTCACCAATC AGAAGGAGGG GCGGGGGTGG
  GGGTGTTACA ATGTGAAGCA ACAAAATGTT AGTTAAAAGT CATAGGTTTT AAAACTCCAC
  AACAGAGGTT TGGTTTCCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49127807	NES12428149	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30366459					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49127807	NES12428149	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:94092418 () rs orientation: forward

Symbol	Name	Function Class
Gm24737	predicted gene, 24737	400 bp upstream