rs30367688 SNP Detail

Summary

• ID
  rs30367688
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:36787084 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAC CTGATCCTGC CTTCACTCAA
  Y
  TACACCCTGC CGGGGAGGGA AATAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45923020	mCV22310710	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss133122061	ENSMUSSNP305624	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30367688					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:36787084 () rs orientation: forward

Symbol	Name	Function Class
Gm53282	predicted gene, 53282	1449 bp downstream
Ptn	pleiotrophin	within coordinates
Rr146140	regulatory region 146140	within coordinates
Tssr60337	transcription start site region 60337	175 bp upstream
Tssr60338	transcription start site region 60338	149 bp upstream
Tssr60339	transcription start site region 60339	125 bp upstream
Tssr60340	transcription start site region 60340	92 bp upstream
Tssr60341	transcription start site region 60341	58 bp upstream
Tssr60342	transcription start site region 60342	23 bp upstream
Tssr60343	transcription start site region 60343	2 bp upstream
Tssr60344	transcription start site region 60344	12 bp downstream