rs30368101 SNP Detail

Summary

• ID
  rs30368101
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:3772964 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                                                   
  CCTTCCATGG GTATTTTGTT CCCCATTCTA AGAAGGAACG AAGTATCCAC ACTTTGGCCT
  TCCTTCTTCT TGAGTTTCAT GTGTTTTACA AGTTGTATCT TGGGTATTCT AAGTTTCTGG
  GCTAATATCC GCTTACCAGT AAGTGCATAT CATGTGTGTT CTCTTGTGAT TGGGTTACCT
  CACTCAAGAT GATGTCCTCC AGATACAGCA TTTGCCTACA AATTTCTTAA ATTCATTGTT
  TTTAATAACT GAGTAGTACT CCATTGTGTA AATGTAACAC ATTTTCTCTT AACATTCTTC
  K
  GTTGAGGGAC ATCTGGGTTC TTTTTAGATT CTGGCTATTA TAAATAAGGC TGCTATGAAC
  ATAGTGGAGC ATGTGTCCTT ATTACAAGTT GGAACATCTT CTGGGTATAT GCCCACAAAG
  GGTATTGCAC AATCCTCCTG TAGTACTATA TCCAATTTCC TGAGGAACGG CCAAACTGAT
  TTCCAGAGTG ATTGTACAAG CTTGCAATCC CACCAGCAAT GGAGGAGTGT TCCTCTTTCT
  ACACATTCTC TCCAGCATCT GCTGTTACCT GAATTTTTGA TCTTAGCCAT TCTGACTGGT
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39674401	mCV24438404	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30368101					SNP	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3772964 () rs orientation: reverse

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr389165	regulatory region 389165			within coordinates
Ube2e2	ubiquitin-conjugating enzyme E2E 2			Intron
				Noncoding-Transcript-Variant