rs30368635 SNP Detail

Summary

• ID
  rs30368635
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:132289895 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              CCACATGCTT ACTGGACCTT
  GAACTACATT TTATATGTAA GAAAATTAAA GCATGCTGTC ACAATTTTCC TACTTTGCCA
  AGCGCTAACT AGCAATATTT AAAGAATATA CCCCCCTCCC CCACCGAATG ACCGTTTCTC
  CACTTCTGTC TGGGAAGTTT AAGTTACATA AGGACATCCT TTTTGCACAG CATTTAAGGA
  S
  GAATACTCAT TCAAAGAAAA TAATTTATAT ATAAATTTTA AAATATAAGA AAATGATTTA
  TATACAATAA AGCTTCCTGA ACTATTAGTG ACATAAATTT GGAGTGGGGG GGCAGTAATT
  CTGGGAGAAA GAGAAGGTAT AAACTCATCT ATTTTTATAT TTACTTGAAT AGAGATGGGA
  GAGCAGAGCC AAGGGTATGG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45922570	mCV24778884	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss133730201	ENSMUSSNP3418624	ENSEMBL	ENSEMBL_Sanger	r	SNP				G
ss321965808	CHEV_6_132262950	CHEVERUD	SCREENING_POP	r	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs30368635					SNP	G	G	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:132289895 () rs orientation: reverse

Symbol	Name	Function Class
Prb1b	proline-rich protein BstNI subfamily 1B	within coordinates
Tssr2031	transcription start site region 2031	1819 bp downstream