rs30370691 SNP Detail

Summary

• ID
  rs30370691
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:6096048 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCACCTCCGG TTCTGTATTC ACTGTCCGTG TTGTGACTCC
  CACAGTATAA ATTCCTCCAG TTGATCTTCA TGAATTCTTA TATTTGATCC CCCCCCCCCT
  Y
  AGGCCTCTGA ATTCCGAGTG AGTCCGAGTT AAAAATGGGA GGAGCACCCT CTAGCTGATA
  AACCTGGGTA ATGAGGTGTC CGCTTTCAGT TTCCATTCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39675337	mCV24718641	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30370691					SNP	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:6096048 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10491	CpG island 10491	196 bp proximal
D530017H19Rik	RIKEN cDNA D530017H19 gene	within coordinates
Gm8034	predicted gene 8034	1196 bp upstream
Gm59262	predicted gene, 59262	84 bp upstream
Rr370438	regulatory region 370438	290 bp upstream
Rr405816	regulatory region 405816	1537 bp downstream
Rr405817	regulatory region 405817	within coordinates
Rr543275	regulatory region 543275	1578 bp distal
Rr543276	regulatory region 543276	1714 bp distal
Rr543277	regulatory region 543277	within coordinates
Rr543278	regulatory region 543278	41 bp proximal
Rr543279	regulatory region 543279	655 bp proximal
Rr543280	regulatory region 543280	994 bp proximal
Rr543281	regulatory region 543281	1097 bp proximal
Rr543282	regulatory region 543282	1290 bp proximal
Rr543283	regulatory region 543283	1353 bp proximal
Rr543284	regulatory region 543284	1401 bp proximal
Syvn1	synovial apoptosis inhibitor 1, synoviolin	558 bp upstream
Tssr154538	transcription start site region 154538	86 bp upstream
Tssr154539	transcription start site region 154539	611 bp upstream
Tssr154540	transcription start site region 154540	1003 bp upstream
Tssr154541	transcription start site region 154541	1037 bp upstream
Tssr154542	transcription start site region 154542	1063 bp upstream
Tssr157816	transcription start site region 157816	1117 bp upstream
Tssr157817	transcription start site region 157817	930 bp downstream
Tssr157818	transcription start site region 157818	1392 bp downstream