TGTGC TCCTATATAC AAAAGCTCAA R TCTATTTTCA AATACAAGAA AAGAC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss47440955 | NES11019573 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | G | A | A | A | A | A | A | G | A | A | G | A | ||
ss144536945 | ENSMUSSNP1713531 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | ||||||||||||||||
ss319761657 | CHEV_1_67176949 | CHEVERUD | SCREENING_POP | f | SNP | A | A | |||||||||||||||
SNP Consensus Information | ||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs30370965 | SNP | A | A | A | G | A | A | A | A | A | A | A | G | A | A | G | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss47440955 | NES11019573 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr1:67169534 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cps1 | carbamoyl-phosphate synthetase 1 | within coordinates | ||||||
Tssr7186 | transcription start site region 7186 | 1442 bp downstream | ||||||
Tssr7187 | transcription start site region 7187 | 1327 bp downstream | ||||||
Tssr7188 | transcription start site region 7188 | 1223 bp downstream | ||||||
Tssr7189 | transcription start site region 7189 | 1322 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 12/17/2024 MGI 6.24 |
![]() |
|