rs30371185 SNP Detail

Summary

• ID
  rs30371185
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:4249558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAGGTCATA CAAGAGAGCT GCAGGCAGGT CATAGGCTCT
  CTAGAAAAGC AGTTGGAGCA GGCCTCTGGG ATACAGATGG CAGGACCCCA CAGTCAGTGG
  R
  AATGACAGAG AGGCAGCAGC TCCTGCTTTT GAAGAGCAAG GTAAGGGTCC AAATATGTAC
  TGAGTTGTGT GGCCTCGACA TAGAAACCCT GAGTCCCCG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39675865	mCV22745992	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss146004772	ENSMUSSNP565859	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss325715567	CHEV_19_4199559	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30371185					SNP	A	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:4249558 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10391	CpG island 10391	1668 bp proximal
Rad9a	RAD9 checkpoint clamp component A	within coordinates
Tssr157469	transcription start site region 157469	1816 bp downstream