rs30371599 SNP Detail

Summary

• ID
  rs30371599
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:35947128 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGCTAGTG TTCTTAACCA
  CTGAGAAATC TCACCAGGAG TAAGAACAAA TTCTTATTAC ACACTGATCT TACAACAATC
  TGTTAAGCAG ATGTTTAATG AGAACTGTAA AAGTAAAAAG CAGCAAAGAA CATTTTAATT
  TCAAAAGTTA AATACATGCT TTTCATTTAT TAGGTTTTTT TTCAACAAGA ATTTTAGTTA
  R
  TTGGAATGTT ATAAATATAC AGAGTCTATA AAAGTCCTTG TGAGTGATCA GTATGTTGTT
  TATAATTATT ATTTGGGGAG TATGTTTTGT TTGAGGCAAA GGTCTCACTA TGTAGACCAG
  GTTAGCTTTA CTTGACTCTG GCCCCAGTGC TGGGATCAAG GGAGGATGCT CTCACACACC
  ACTTCTAATT TATGAAATTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47440408	NES11516731	PERLEGEN	MM_PANEL2	f	SNP	G			G	G	A	G	A		G	G	A	G	A	G
ss149156766	ENSMUSSNP6079706	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30371599					SNP	G	G	G	G	G	A	G	A	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47440408	NES11516731	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:35947128 () rs orientation: forward

Symbol	Name	Function Class
Eri1	exoribonuclease 1	within coordinates
Rr662194	regulatory region 662194	438 bp distal
Rr662195	regulatory region 662195	535 bp distal
Rr662196	regulatory region 662196	440 bp distal
Rr662197	regulatory region 662197	279 bp distal
Tssr80937	transcription start site region 80937	585 bp downstream