rs30372311 SNP Detail

Summary

• ID
  rs30372311
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:35947621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCTACCA TGCTCATTCT
  AGTCCTCAGG CTAGGCACAA GAACCCCTTG AGCAATTTTG CCAGTTCCAT GGTTTATAAC
  TTTAAGTAAA AACTTTTCAA AGATGGAATT CCCTTTGGCA TTACAACCAA GTACTACTAA
  ATACACTGTC ACAAAGATGT AAAGTTTCCC AGAGCCTGCT TGGTGGTGCC CACCTTTAAT
  Y
  CCAGCATGTA GGAGACAGAG ACAAGGGGTA GGGGTGGCAA ATCACTTTCA ATGAGCATAT
  TACAGAGACC TATTTACTCA TGGATCAAAT ACTATTAAAA AAAAAAAAAA AAAGAGTGGC
  CCAAGGAAGA AGGATCACAG ACAACGGCTC TGCGGTGGCG TTCATACGTT ACCCTATTAA
  ACGAGATAAT TAGGTGGGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47440420	NES11516677	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30372311					SNP	C	C	C	C	C	C	C	C	C	T	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47440420	NES11516677	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:35947621 () rs orientation: forward

Symbol	Name	Function Class
Eri1	exoribonuclease 1	within coordinates
Rr662194	regulatory region 662194	931 bp distal
Rr662195	regulatory region 662195	1028 bp distal
Rr662196	regulatory region 662196	933 bp distal
Rr662197	regulatory region 662197	772 bp distal
Tssr80937	transcription start site region 80937	92 bp downstream