rs30372992 SNP Detail

Summary

• ID
  rs30372992
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:77838093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCCTGCAA GGTCTCACTA
  TGTAACCTTG GTGGCTTTCC TGGAACTCTA GACCAGCCTG GCCTTGAACT TCACAGAGAT
  GTCCTTGCCC GTGTCTCCCA GCTGCTGGGG TTAATGGTGT GCACAATCAT GCCTGAGTCT
  CTCTCACTTT GTACAATTGC TCCCCTTCTA TTTGGAGTCA GCCTGGACAT TTACTTCCTG
  K
  AGTCTCTGTT GGTTATGCCT TCAGCCCATG CCTGGACCAC TGTCTTCCAC GTTTTGGCTA
  CTGTCCAGCC TACCCGAGCT CTCAGGGTAG AATGCCATTC TCTCGGAAGC CTTCCCCCCT
  CCCCCATCTC CTGTACATGA CACTCACTCT CAGTCCACCA GACTGTATTC TTGAGTTAGC
  TCATCACATA GACATCAGGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46399915	mCV25042353	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss136662709	ENSMUSSNP6044258	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30372992					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77838093 () rs orientation: forward

Symbol	Name	Function Class
Elovl5	ELOVL fatty acid elongase 5	within coordinates
Rr401538	regulatory region 401538	54 bp upstream
Rr683432	regulatory region 683432	521 bp distal
Rr683433	regulatory region 683433	40 bp proximal
Rr683434	regulatory region 683434	1876 bp proximal