rs30373603 SNP Detail

Summary

• ID
  rs30373603
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:32976814 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATAAACGC AAGGTAGGGT
  CCCGCCCCTC AGAGTGTTGA GGATGCCTTG AAATGTCAGG AGGAGCCTCA GGGACCAGGC
  TGCACCCTTA CAGCCATCTT TGCGCCCTCC ACCCTTGACC CTCTGTGTTC CTTCTTCCTC
  GTTGAGGTTC TTAGGAAAAT CTATCCTTAC CCTTAACTGA ATTGTATGTT AAAAACGTTT
  R
  CCCAGTCCAC AATTGTCCTT GAGTTGTATA TTAATGGTCT GTCTTTTTAA GTTTGTATGT
  CTATAAGTTT TTAATGTCAT GTCACCAGTC CATCAATGAT TTTGCTCACG AGCTTCCGCC
  TTTGTATGGA ATGGCTCATT GTAAACTTGT GTCTACCCAG AAGGCTCCCT TCTGAGGTCT
  GCTGGTGAGT GCAGCTGCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss39179173	mCV22706771	ABI	CRAMUS_MOUSE	f	SNP	A	A	G					G
ss62258301	NES17204623	PERLEGEN	MM_PANEL2	f	SNP			G	G	G	G	G		G	G	A	A	G	A	A
ss139248745	ENSMUSSNP3536548	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs30373603					SNP	A	A	G	G	G	G	G	G	G	G	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62258301	NES17204623	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:32976814 () rs orientation: forward

Symbol	Name	Function Class
Arhgap22	Rho GTPase activating protein 22	within coordinates
D14Mit175	DNA segment, Chr 14, Massachusetts Institute of Technology 175	1354 bp proximal