rs30374967 SNP Detail

Summary

• ID
  rs30374967
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110467696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGC TCCAAGGGCC GTAGTGACAC
  K
  CGACCCAGAG CTTGCAGCAA GGCTA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46400698	mCV25039887	ABI	CRAMUS_MOUSE	f	SNP		G					T		G
ss47780491	NES11982446	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G		G	G	G	G		G	G	T	G		T
ss136958673	ENSMUSSNP6613773	ENSEMBL	ENSEMBL_Sanger	f	SNP		G							G
ss323193673	CHEV_9_110541132	CHEVERUD	SCREENING_POP	f	SNP												G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs30374967					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	T	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47780491	NES11982446	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110467696 () rs orientation: forward

Symbol	Name	Function Class
Nbeal2	neurobeachin-like 2	within coordinates
Rr198752	regulatory region 198752	496 bp distal
Rr198753	regulatory region 198753	104 bp proximal
Rr198754	regulatory region 198754	1505 bp proximal