rs30375116 SNP Detail

Summary

• ID
  rs30375116
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:124938423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCC CCAATGTCCA GGCCCACATC
  Y
  CTCCACTCCT ATCCGTAAGC CATTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45923438	mCV22300848	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss133612403	ENSMUSSNP571028	ENSEMBL	ENSEMBL_Sanger	f	SNP			T
ss321938154	CHEV_6_124911478	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30375116					SNP	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:124938423 () rs orientation: forward

Symbol	Name	Function Class
Cops7a	COP9 signalosome subunit 7A	Intron
Tssr63233	transcription start site region 63233	1882 bp upstream
Tssr63234	transcription start site region 63234	965 bp downstream