rs30375669 SNP Detail

Summary

• ID
  rs30375669
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:117495818 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCCTAACC TGTCAATGAC
  AAAGCCACAG GGCACTAGAG ATGGGAGCAG CAGCCAGCAG TGAGGAAAGC ATTTAGCCAA
  GCATCCTCGA GCGCTGCTCT ACTGCACCGA TGCCCCCTAT AAACAGTCCT ACCAGCATGG
  GCTCCTCAGA TCTCTCAAGA CCAGAACAAG ACCATGAGCC TCTGCAACCA ACACTTCCCA
  R
  CCAAGACAGA CAGAAGAAGC CAGGCTCTCC GCGGGGCAGC TAAGAGCATC CTCCTGCATA
  GCTCCGGAAG CCAACCTAAG AAAGGGGGAA GGGCTGTGCG TGTCATACAG CTGTGGGCTC
  ATGCATGTAG AGGCTAGAAA TCAACCTCGG GCAGGCGCTG CCCCTTGGGT ATCAACCACT
  TTTCCTTTCT TTGAGACAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46401200	mCV25050700	ABI	CRAMUS_MOUSE	f	SNP		A						G
ss61234287	NES16850663	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	G	G		A	G	G	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs30375669					SNP	A	A	G	G	G	G	G	G	A	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61234287	NES16850663	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:117495818 () rs orientation: forward

Symbol	Name	Function Class
Rbms3	RNA binding motif, single stranded interacting protein	within coordinates
Rr193213	regulatory region 193213	1383 bp proximal