rs30377863 SNP Detail

Summary

• ID
  rs30377863
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:42773796 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTT AATCATGAAG GGAGGGGCAA
  R
  AAATTAATTG TCCTAAATCC TTCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46402014	mCV23035060	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss136386069	ENSMUSSNP1085337	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss322936126	CHEV_9_42670583	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs30377863					SNP	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:42773796 () rs orientation: forward

Symbol	Name	Function Class
Gm55338	predicted gene, 55338	371 bp upstream
Gm67530	predicted gene, 67530	within coordinates
Grik4	glutamate receptor, ionotropic, kainate 4	within coordinates
Rr677285	regulatory region 677285	1926 bp distal
Rr677286	regulatory region 677286	971 bp distal
Rr677287	regulatory region 677287	902 bp proximal