rs30379215 SNP Detail

Summary

• ID
  rs30379215
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:106520618 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAG ATGCCCAGGG CATGGCAGGC
  W
  CAGCCAGCAA TCCTTCAGAG TCTGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46400171	mCV23588581	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
ss136939121	ENSMUSSNP1916731	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		A
ss323186500	CHEV_9_106545750	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30379215					SNP	T	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:106520618 () rs orientation: forward

Symbol	Name	Function Class
Gm28111	predicted gene 28111	within coordinates
Grm2	glutamate receptor, metabotropic 2	1115 bp downstream
Rr686373	regulatory region 686373	within coordinates
Rr686374	regulatory region 686374	26 bp distal
Rr686375	regulatory region 686375	565 bp proximal