rs30381826 SNP Detail

Summary

• ID
  rs30381826
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83016326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGCTGTCA GATGAAAAAA
  ATTGTTTCTA TATTAGAATC ATTCTATAAG CTGATATCTG CAAAAAGAAA AGATCGTTAT
  CCTCGAATGC ATGGAAATAA TGAGTGCAGA GGTTAAGATT AAATGCCTTT CTTCAAACTT
  AGTAGCAGAA GTCTGGCTGA CCTTAATACT CCTGACAATT AATCTTGAAC AGGATGCTGG
  R
  AGCACCCACC AGGGGCAGCT GCCCTCCTCT CCTCAGCCTG TTTCACCTTC TTAGCTTTTG
  GATGTGGTGT CCTTTGCACC GTTGTGGCTA GTTGAGGGGA ACGCCCTTCA TTCTATCTGT
  ACACAGACTG TTTAAAGATG GCAACTTGGG TCAAGTCTTC AGAGTTCACT AGATCCACCA
  GGAAGACCTG GTTCATCTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45423374	mCV25188746	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss135411380	ENSMUSSNP3705199	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs30381826					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83016326 () rs orientation: forward

Symbol	Name	Function Class
Rr578836	regulatory region 578836	1227 bp proximal
Rr578837	regulatory region 578837	1341 bp proximal