rs30383566 SNP Detail

Summary

• ID
  rs30383566
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67739611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGAG CGCGGCAGAG TTGATTCCTG
  R
  TGTTCCAGGA TAGCTGGTCC GGGCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46403108	mCV25294857	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss136586202	ENSMUSSNP1559914	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss322992779	CHEV_9_67680136	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30383566					SNP	G	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67739611 () rs orientation: forward

Symbol	Name	Function Class
C2cd4a	C2 calcium-dependent domain containing 4A	within coordinates
Cpgi21983	CpG island 21983	441 bp distal
Rr196859	regulatory region 196859	1590 bp proximal
Rr206662	regulatory region 206662	within coordinates
Tssr90357	transcription start site region 90357	within coordinates