rs30389316 SNP Detail

Summary

• ID
  rs30389316
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:78172531 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGACTACCAA AGTTGCTTGC AGCAAGTGAA GCCATTGTGT
  TTTTTTATAG ACCTTAAGAC ACATAGTTCA TTTGAATGCT GCTCAGTGCT TTAGGAACAA
  R
  CTGGTAGAAA ATAAATTATG CATATTAGAT GTAAATGAAT TCATATACAT AATTTTAGGG
  CAATTTTAGG GCATCATACC TGTTGCTTCC TAGTTCTGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39180809	mCV25278336	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss324674269	CHEV_14_78334898	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30389316					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:78172531 () rs orientation: forward

Symbol	Name	Function Class
Epsti1	epithelial stromal interaction 1	within coordinates
Rr300474	regulatory region 300474	1732 bp distal
Rr389888	regulatory region 389888	1254 bp downstream