rs30392564 SNP Detail

Summary

• ID
  rs30392564
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:17697139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCA AAAGGACAAT TCGAAGGTTT
  Y
  CTATGTTGAA TTACAAAAGC TTATT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss46403476	mCV24470059	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss136214441	ENSMUSSNP3717663	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
ss322872979	CHEV_9_17590287	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs30392564					SNP	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:17697139 () rs orientation: forward

Symbol	Name	Function Class
Gm48849	predicted gene, 48849	56 bp upstream