rs30396931 SNP Detail

Summary

• ID
  rs30396931
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:45283479 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AATCATCTGA TTTTATTCAA TGTACTATTT GAATGATTGT GGAACACTTA CAAACTAACT
  GATCTCTAAT TAAGTAACAT CTGTATAATA CAAACAACAA TCTGACATAC TTTTGGGGGC
  TAGTTAGAAG GCTCAGTGGT TGAGAGCATT GACTTTTCTT CCAGAGGTCC TTAGTTCAAT
  TCCCAGCAAA CACATGGTGA CTCAAAACCA TCTGCAATAG GATCTAATGC CCCATTCTGG
  TGTATCTGAA GATAGCAACA GTGTACTCAT ATAAATAAAA TAAATAAATC TTAGGGGAAA
  R
  AAAGAAAGAA AAGAAACAAC AAAATGGTCC CTAATGTTAA CTTGTTAGGG CTTACTCTGG
  GATTAATATT TTTCTGACCA TTTTGGAGTC TCTGTAGTTG AATTGGCCAG TCACTTCTGA
  TCCTACTTTC TAATGCCTTA GAGTATCAAG AACTTAGATT TTAGACACGC ATCATCACAT
  CAGTCTAGAC CTCAGATTGT GAAAGTCCAC ATCATCTCCC ACTAGAGTGA ATTTAACACC
  AATTTTATAT CCCCTGGACT CTTATGGGAC ACCCTAATTG TACCTGAGGT GAAAGAAAAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45923792	mCV24094486	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30396931					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:45283479 () rs orientation: forward

Symbol	Name	Function Class
6330419E04Rik	RIKEN cDNA 6330419E04 gene	within coordinates
Cntnap2	contactin associated protein-like 2	Intron