rs30402085 SNP Detail

Summary

• ID
  rs30402085
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146791155 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTGCGGAGA CGCTGAAAGA TAATGTGTTA CCATTTAAAA
  TTTTACGCTT GGTTATTGTC CGTTTGTTTT GTTTCCTTTT TTAATTTCCA CTAATAAAGG
  Y
  TTTCTCTATT CTATTGTTCA TATTATCCAA AGGCAGAGAG TCTGTGAGAG TGAAGTATAC
  CGGTGTTGAG GGGATTTGAA ATGAAATGTG TATTTTACA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45425809	mCV23261212	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss136047090	ENSMUSSNP430604	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30402085					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146791155 () rs orientation: forward

Symbol	Name	Function Class
Gm29771	predicted gene, 29771	within coordinates
Rr587120	regulatory region 587120	1612 bp distal
Rr587121	regulatory region 587121	370 bp distal