rs30403120 SNP Detail

Summary

• ID
  rs30403120
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147978272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTATTTATTT ATCTATTTAT TGGTTTTTTT GTTGGTTTGT
  TTTTGTTTTG CTTTGTTTTC CGACAGGGTT TCTCTGTGTA GCCGACTGTC CTGGACCTCA
  Y
  GCTGTAGACC AGGTTGACCT TCAACTCAGA GATCTGGCTG CCTCTGCCCC CCACATTCTG
  GGATTAAAGG CATATGCCAC CACTGCCTGG CTTGTTTGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45425225	mCV22802078	ABI	CRAMUS_MOUSE	f	SNP		T	T	C
ss136057902	ENSMUSSNP936976	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30403120					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147978272 () rs orientation: forward

Symbol	Name	Function Class
Rr375892	regulatory region 375892	1327 bp upstream
Rr587183	regulatory region 587183	170 bp distal
Rr587184	regulatory region 587184	within coordinates