rs30406884 SNP Detail

Summary

• ID
  rs30406884
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:7888985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTACTATGT GGGTTTTTTT GTTTGTTTTC TAGTTTTCCC
  AATGGTTGTT TCAACACAGA GTAGTCTGCC CCAGTGTCTA TTAGAAAGTC CGTAGGGGTC
  Y
  CTTCCACAGT CAGTGTTACC CTAGACTTGG GGAGGGGGTC CAAGCCCCAT CTCCCCTAAT
  CATCATCCTC TAGAGCCAGG ACTTTAAGGG CCTTCCCCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39181892	mCV24308228	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	T
ss139097546	ENSMUSSNP78169	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30406884					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:7888985 () rs orientation: forward

Symbol	Name	Function Class
Gm62777	predicted gene, 62777	within coordinates
Rr389213	regulatory region 389213	within coordinates