rs30407874 SNP Detail

Summary

• ID
  rs30407874
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5900342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACA ACTGGGCTGG GCCGGGCCTC
  R
  AGTGCTGACT CACGATGCCT GCAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39677901	mCV25335631	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss146013955	ENSMUSSNP714636	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs30407874					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5900342 () rs orientation: forward

Symbol	Name	Function Class
Frmd8	FERM domain containing 8	660 bp downstream
Frmd8os	FERM domain containing 8, opposite strand	within coordinates
Gm59609	predicted gene, 59609	1900 bp upstream
Gm59610	predicted gene, 59610	1071 bp upstream
Rr370436	regulatory region 370436	within coordinates
Tssr154520	transcription start site region 154520	1792 bp downstream
Tssr154521	transcription start site region 154521	1646 bp downstream
Tssr157784	transcription start site region 157784	353 bp upstream
Tssr157785	transcription start site region 157785	300 bp upstream