rs30408610 SNP Detail

Summary

• ID
  rs30408610
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:47718929 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCGA ACTGAGGTCC ACGGCCACAC
  G
  ACACTCCATT GCACAAAACA AAAAC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss39679240	mCV25365546	ABI	CRAMUS_MOUSE	f	SNP	G	G
ss146469448	ENSMUSSNP6032029	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs30408610					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:47718929 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11035	CpG island 11035	396 bp proximal
Gm58934	predicted gene, 58934	within coordinates
Rr370527	regulatory region 370527	597 bp upstream
Rr406020	regulatory region 406020	1448 bp upstream
Rr549123	regulatory region 549123	within coordinates
Rr549124	regulatory region 549124	707 bp proximal
Rr549125	regulatory region 549125	848 bp proximal
Rr549126	regulatory region 549126	976 bp proximal
Rr549127	regulatory region 549127	1059 bp proximal
Rr549128	regulatory region 549128	1203 bp proximal
Sfr1	SWI5 dependent recombination repair 1	1230 bp upstream
Tssr156884	transcription start site region 156884	1253 bp upstream
Tssr156885	transcription start site region 156885	1284 bp upstream