rs30410046 SNP Detail

Summary

• ID
  rs30410046
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:55146911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTA TTGCGGGCCT CCAGCTCCAT
  Y
  CCATCTCCTT TCTATAGTGT TCTGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45926288	mCV24062617	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss133207715	ENSMUSSNP2732455	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss321805430	CHEV_6_55119920	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30410046					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:55146911 () rs orientation: forward

Symbol	Name	Function Class
Inmt	indolethylamine N-methyltransferase	701 bp downstream
Rr136024	regulatory region 136024	111 bp distal
Rr136025	regulatory region 136025	1690 bp proximal
Rr144444	regulatory region 144444	396 bp proximal
Rr144445	regulatory region 144445	1693 bp proximal