rs30411323 SNP Detail

Summary

• ID
  rs30411323
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71534114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTAGG ATTGGTTCTC ACCATCTACA
  Y
  TGGGCAGTAA CTCCAACTCC AGGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45925815	mCV24702399	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss321818041	CHEV_6_71507124	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs30411323					SNP	C	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71534114 () rs orientation: forward

Symbol	Name	Function Class
Chmp3	charged multivesicular body protein 3	within coordinates
Rr141072	regulatory region 141072	914 bp distal
Tssr61385	transcription start site region 61385	1358 bp upstream