rs30416889 SNP Detail

Summary

• ID
  rs30416889
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:82931762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AAAGAGGATG TCAGAGCTCC TGGGACTGGT GTTACACACA GTTGTGAGCT ACCATTACAG
  CTGCTAGGAA TTGAACCTGG GTCCTCTGGA TGAGCAGCAA GTGCTCTTAA CTGCTGAGCC
  ATCCCTCCAG CCTATGATGT GCTATTCATT TTACATGTTC CTAGTTTTAA TTTCTTGTCT
  TATTTGGGAT TTTTACATCT AAGTTTATGG TAAAAATAAT TTTACTTTTC TCCTTTTTTA
  TTAACAAAAT TGGTTCTTTG ACAATCAGAT ATATATACAT ATATATATAT ATGTATATAT
  R
  TACATGTGTA TACACACACA CACACACACA CACACACACA CACATATATA TATATATATA
  TATATATATA TATATATATA TATACATATA TATCATTTGG AATACTCTCC ACCCTATCAC
  CTGCTCTTAT TTCCTCCCAC CCCTGTCCAC CCATATTTAC TAGTTTTTGT TTTGTTTATT
  GTCCCACTGA GTTCAACTAG GGTCATCTGT GTGATCCAGA GCATAGCAGT TCATGTATAA
  CTGGATACTG ACTATGCCTC CCATCCTCCC AGATTCTATT AATTCTATTG ATTCTGCAAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss45927165	mCV23177986	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs30416889					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82931762 () rs orientation: forward

Symbol	Name	Function Class
Gm19287	predicted gene, 19287	1645 bp downstream
M1ap	meiosis 1 associated protein	Intron
Rr379683	regulatory region 379683	1154 bp upstream